PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004778-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 577aa MW: 65290.1 Da PI: 6.1676

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004778-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.7	7.7e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k++l evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v AUR62004778-RA 6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EVIAEVDLYKCEPWDLPsKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********5334455777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g++t Wvmheyrl AUR62004778-RA 100 S-QLRAVGMKKTLVYYRGRAPHGHRTGWVMHEYRL 133 9.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MAPVALPPGF RFHPTDEELV AYYLKRKING RKIDLEVIAE VDLYKCEPWD LPSKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QLRAVGMKKT LVYYRGRAPH 120 GHRTGWVMHE YRLDERECEV VSGLQDAYAL CRIFKKTTPP TPPKIAPQYG YTTNMAQMSS 180 DQQSSSIDIY SEGRCDDFES SAYSVPIERS CTTNIFAQGH ASSSTSHRNM GDGQWLQYLN 240 DHDDFSFPTP AFHNSGSLSY PPSKVDIAIK CARLQHRFTL PPLEVEGSSN YGATTFSNMG 300 MCYNNGGTST GGDILDEILS VAQAQQDLIS HPNTMIGGQS YNNNNYGDAM NNQANSMRPI 360 MENSWEDNMN TSLVGMGNAD ELKSERMVDF SDLVVFDERN SEKDTRGEYG MVPIENTSTL 420 FHGEDDIEDE LNKNFINGND IDNFSNTPNF EVFEEVEVNQ SLYISSQWLA ETRFHHVQPT 480 KTVQVYLQRA IGLRNNMKKD DLFEEVDMSN KIKSSFFDKL AGFARNSIGK STPKMFAKNR 540 PCCYANKVER FASSWLANRV WPSLTVVLAL CMYHMG*

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MAPVALPPGF RFHPTDEELV AYYLKRKING RKIDLEVIAE VDLYKCEPWD LPSKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QLRAVGMKKT LVYYRGRAPH  120
GHRTGWVMHE YRLDERECEV VSGLQDAYAL CRIFKKTTPP TPPKIAPQYG YTTNMAQMSS  180
DQQSSSIDIY SEGRCDDFES SAYSVPIERS CTTNIFAQGH ASSSTSHRNM GDGQWLQYLN  240
DHDDFSFPTP AFHNSGSLSY PPSKVDIAIK CARLQHRFTL PPLEVEGSSN YGATTFSNMG  300
MCYNNGGTST GGDILDEILS VAQAQQDLIS HPNTMIGGQS YNNNNYGDAM NNQANSMRPI  360
MENSWEDNMN TSLVGMGNAD ELKSERMVDF SDLVVFDERN SEKDTRGEYG MVPIENTSTL  420
FHGEDDIEDE LNKNFINGND IDNFSNTPNF EVFEEVEVNQ SLYISSQWLA ETRFHHVQPT  480
KTVQVYLQRA IGLRNNMKKD DLFEEVDMSN KIKSSFFDKL AGFARNSIGK STPKMFAKNR  540
PCCYANKVER FASSWLANRV WPSLTVVLAL CMYHMG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-107	NAC family protein