PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004648-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 335aa    MW: 38928.2 Da    PI: 6.8286
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004648-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.21.3e-5281361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yLk kv++ k++  +vi e+d+y++ePwd++ k k+   e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  AUR62004648-RA   8 VPPGFRFHPTEEELVGYYLKGKVNSLKFDR-DVIIEIDLYRMEPWDIQdKcKLGYdERNEWYFFSHKDRKYPTGSRTNRATAAGFWKATGRDKAV 101
                     69***************************9.99**************943433333556************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ls k++ +g++ktLvfykgrap+g+ktdW+mheyrl
  AUR62004648-RA 102 LS-KNNIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 136
                     **.8899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MNHTELCVPP GFRFHPTEEE LVGYYLKGKV NSLKFDRDVI IEIDLYRMEP WDIQDKCKLG  60
YDERNEWYFF SHKDRKYPTG SRTNRATAAG FWKATGRDKA VLSKNNIIGM RKTLVFYKGR  120
APNGRKTDWI MHEYRLQTSE HAPPQAKGWV VCRAFKKPSP SHKQGYEAWS HHQNQYYYMR  180
NNNYDRHIGS PSIPDTSSPN TDPSDSINQC HTNFHNPQSH PMQQLPYTNF NPELIIENQL  240
IIDLPRLDSP SFSTSFATKE AYENHQQSGG IINEEHHHND HESSNNKWEI LDNLLGNSSS  300
FSNNDLPNMH LVPHDYELEV QNQLGSFLEC FPNL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.11e-100NAC family protein