PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004622-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 362aa MW: 39856.6 Da PI: 7.2367

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004622-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.7	1.8e-06	219	271	7	62
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++rkq N ArrsR RK+++i+eLe+ +++L+a + +le l ++ l +e AUR62004622-RA 219 AKRKQHN---ARRSRVRKLQYIAELERNAQVLQAAGAEVSAQLEFLDQQNLILGME 271 5788888...************************9999888888888877766666 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MLAECMANTP EGFSDIQSGP CRGPMSLPPK GPSQAQYCGL IPTDKQVNVP NSCPTDVLSE 60 EPPPWLEDLL NEPESPINRT HRRSASDSSA YFAVDTSADE LWLRNVIGAL SYSNQMPHNF 120 NRIPQVSFNT EKSNAVTASN KQQQDKLGKS PSTSTHPSLL PNGLINAKED ADCQALGMSC 180 SPEPDVIKSV GNKPETENSS GGGGDCSHLK PPAALNSDAK RKQHNARRSR VRKLQYIAEL 240 ERNAQVLQAA GAEVSAQLEF LDQQNLILGM ENRALKQRLE SLSQEHYIKS MEQEILDKEL 300 ARLQYLYQLQ RNLSHNQPRP RQKQNPAVHR RGKSYNDVDS QLSKLSLHPP KPIAPSNAAL 360 E*

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MLAECMANTP EGFSDIQSGP CRGPMSLPPK GPSQAQYCGL IPTDKQVNVP NSCPTDVLSE  60
EPPPWLEDLL NEPESPINRT HRRSASDSSA YFAVDTSADE LWLRNVIGAL SYSNQMPHNF  120
NRIPQVSFNT EKSNAVTASN KQQQDKLGKS PSTSTHPSLL PNGLINAKED ADCQALGMSC  180
SPEPDVIKSV GNKPETENSS GGGGDCSHLK PPAALNSDAK RKQHNARRSR VRKLQYIAEL  240
ERNAQVLQAA GAEVSAQLEF LDQQNLILGM ENRALKQRLE SLSQEHYIKS MEQEILDKEL  300
ARLQYLYQLQ RNLSHNQPRP RQKQNPAVHR RGKSYNDVDS QLSKLSLHPP KPIAPSNAAL  360
E*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	221	234	RKQHNARRSRVRKL
2	227	233	RRSRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.1	1e-41	bZIP family protein