PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62004612-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 207aa MW: 22404.9 Da PI: 8.3439 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.9 | 1.8e-13 | 142 | 187 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++Le+AveY+k+Lq AUR62004612-RA 142 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKNLQ 187 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
PHNTHQGGLT QLLTAGTNTS SSAAGPGPIP VSRPNTSYNI SPADPGFFEG GGGGGAQQAG 60 NSVAFQRMNS SPAEFLSANI DGLRENDSEQ HSPNFSSHRR GEQSGQLSTA SSLVEMEMEK 120 LLEDSVPCRV RAKRGCATHP RSIAERVRRT RISDRIRKLQ ELVPNMDKQT NTADMLEEAV 180 EYVKNLQKQI QDLTEQQKKC KCVVKS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09180.1 | 2e-53 | bHLH family protein |