PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004572-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 389aa MW: 42975.8 Da PI: 5.0635

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004572-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.7	1.2e-32	55	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......tk 79 lp+G++F+P+d++l+ e+L++k +++ +++ +i++++ i++++P+dLp ++++ ++++fF+k++++ya+g+rk+r+ + AUR62004572-RA 55 LPAGVKFDPSDSQLL-EHLAAKSGAREvkphafIDE--FIPTLEmdkgICYTHPQDLPG-ATKDGNSIHFFHKTSNAYASGQRKRRKihneqnQE 145 799**********.999999998555433222..3333322345********4.45667899**************856665555 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 + +W++tgk+k+v++ +g ++g+kk++v+yk + +k++k++Wvmh+y+l AUR62004572-RA 146 NVRWHKTGKTKPVYD-NGVQKGCKKIMVLYKSseKGSKPVKSNWVMHQYHL 195 899********.999*******6422667888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MAKSWIVDSK GIAKKVRHAS LPSGVQIKDC GAKRECPKCH HWIDNSDVSY EWPGLPAGVK 60 FDPSDSQLLE HLAAKSGARE VKPHAFIDEF IPTLEMDKGI CYTHPQDLPG ATKDGNSIHF 120 FHKTSNAYAS GQRKRRKIHN EQNQENVRWH KTGKTKPVYD NGVQKGCKKI MVLYKSSEKG 180 SKPVKSNWVM HQYHLGSEDD EKDDAFVVSK IFYQQSKQTE TEDNGVAATD DSNAVLNPYC 240 PKTPKIVTPN PPRGSSAHCD DALDDNVLAA AEDTTCAKVE SCITPSTSYM GNVDPPELAG 300 ESQVQDPGLN DFGLNDFGLN DFDESLLCKE IFSSCAPLDD TMSLNDLDDY CQSYGISNFD 360 NIHLDSELQF ADLLLGSQDS VLNWVDKP*

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MAKSWIVDSK GIAKKVRHAS LPSGVQIKDC GAKRECPKCH HWIDNSDVSY EWPGLPAGVK  60
FDPSDSQLLE HLAAKSGARE VKPHAFIDEF IPTLEMDKGI CYTHPQDLPG ATKDGNSIHF  120
FHKTSNAYAS GQRKRRKIHN EQNQENVRWH KTGKTKPVYD NGVQKGCKKI MVLYKSSEKG  180
SKPVKSNWVM HQYHLGSEDD EKDDAFVVSK IFYQQSKQTE TEDNGVAATD DSNAVLNPYC  240
PKTPKIVTPN PPRGSSAHCD DALDDNVLAA AEDTTCAKVE SCITPSTSYM GNVDPPELAG  300
ESQVQDPGLN DFGLNDFGLN DFDESLLCKE IFSSCAPLDD TMSLNDLDDY CQSYGISNFD  360
NIHLDSELQF ADLLLGSQDS VLNWVDKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	1e-94	NAC family protein