PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004554-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 334aa    MW: 38417.9 Da    PI: 6.9686
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004554-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.81.7e-52151431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eel+++yL+kkv+++k++l +vi evd++k+ePwd+++k+k     +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  AUR62004554-RA  15 VPPGFRFHPTEEELLQYYLRKKVASEKIDL-DVILEVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATATGFWKATGRDKVI 108
                     69****************************.99**************964444222455************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s +++ +g++ktLvfykgrap+g+k+dW+mheyrl
  AUR62004554-RA 109 YS-NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143
                     **.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MRTKMNISVN GESRVPPGFR FHPTEEELLQ YYLRKKVASE KIDLDVILEV DLNKLEPWDI  60
QEKCKIGTTP QNDWYFFSHK DKKYPTGTRT NRATATGFWK ATGRDKVIYS NSRRIGMRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDESTNNN NDTHVTSLRS GDFIQEEGWV VCRVFKKKNH  180
LKDLDSPIKT SSSSMALESH SSISMLDSPS DHDQHDRDDQ GALEQIFQYM GGKSQKMNNN  240
NITKSSSSQN QLERFMKLPS LESPNNNSTT TTTLYYQTLP ENDLVSMTKP ETDPIYTGLS  300
DWATLDKLVA THLNGQTIYS PLSNDHEHEL DQLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-103NAC family protein