PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004153-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 324aa MW: 35178.3 Da PI: 7.0033

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004153-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6.3e-10	275	301	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 hn+ Er+RRd+iN+++ +L++l+P++ AUR62004153-RA 275 VHNQSERKRRDKINQKMKTLQKLVPNS 301 6************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MNQNHCVPIW NNLEDGGSSI QLQPPPPLPP PLQLPLSKAL PSQSLSASLS AGPDTSMLDY 60 EMAELTWENG QLTMHGLGLP RVPSKSNLAE AAAWPEKTST RANGMLESVV NQAYHNPKPT 120 PSQGHQGTCD QDEDDIVPWY GPLTPAPVPV TLDALVPNTN VRGCSTRVGS CSAAARVPMG 180 SDWSVSKSAL ESTRKKRHAE DTCEQLRSMN NNNNGLTSTS FGPPSPEYTM TITVDDHDSV 240 SHSRSQRERG EEEENQKQGT AKSGVSTKRS RAAAVHNQSE RKRRDKINQK MKTLQKLVPN 300 SNKGIEMTPL HYLLNIMVLD ASS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	285	ERKRRD
2	281	286	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-43	bHLH family protein