PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004028-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 337aa MW: 38019.7 Da PI: 7.8562

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004028-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.5	6e-08	232	284	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ +r+ +NRe+ArrsR RK++ +e+L++ + eL+ + ++ + l ++ +++ AUR62004028-RA 232 RKRKRMLSNRESARRSRMRKQKHLENLRNNANELKIQTRERSNHLRLMTHQIQ 284 57899******************************998655555555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MMSTVLPSES VFSNSSSNPF NGGFTPWENL ESFFTSTLYK PNDSNKPKSS NKSNLSCYHA 60 GFGLGSERPN LSCYHAGSDL GSEQPNLSCY HAGSDLGSEF PNKVLPSFDN TNLGSCHIGS 120 DLGSESQSTN TTCFDQLNLS QYHANFESPT QQSPPFDELD LGPYHVGTDL GSERPKRSPS 180 YEELSPNQDQ PNQNSNPTNS SSSSGSSYDD PIQNPNRRTC PDDPAKNNID ERKRKRMLSN 240 RESARRSRMR KQKHLENLRN NANELKIQTR ERSNHLRLMT HQIQHVRREN ERLKAESFIL 300 QRKLMHLSNI WKLQQLQQQQ CSFSTTSNLM HTPMQI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	253	RKRKRMLSNRESARRSRMRKQK
2	245	252	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37730.1	2e-20	bZIP family protein