PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003896-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 385aa    MW: 41461.9 Da    PI: 4.9417
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003896-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.34.1e-061691903455
                     TTS-STCHHHHHHHHHHHHHHH CS
             HLH  34 pskKlsKaeiLekAveYIksLq 55 
                      s+K +Ka++L +A+eY+k+Lq
  AUR62003896-RA 169 LSEKTDKASMLDEAIEYLKQLQ 190
                     589******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MVFTNNSSAP PQEQPDDISL FLRQILHRSS SSSSPNQPLI SASSSPAIMR SHAADQLPSF  60
STLFNNISAG PSAVFSGSDR LAVNRISREN DVVLPPPTTG FPVPAGSNLS SESLSGSVQL  120
RSFDNNDFPE DNDCESEEGN DVAVEEGETK QQQLRNQSKR SRAAEVHNLS EKTDKASMLD  180
EAIEYLKQLQ LQVQMLSMRN GVSLHPMCLP GGQGILHPSQ LSQMGIDFDD ASGSYDMNMT  240
TALNTIPETS NTTLNLPNQC TSSVRPSLAT VPSPSIINSE AMSFGLESCI PASFHPYQPR  300
NPPQAVGRER SMPHERIGVN NIEPKSLGAV TTSTRLGHNS VQERMQQKHA PQETHLENLS  360
GQNQLVSSNF TGLFAATSGA QMTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.18e-33bHLH family protein