PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62003725-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 232aa MW: 26152.1 Da PI: 5.0154 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.9 | 7.5e-11 | 72 | 116 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+ E+ ++++ ++G+g Wk+Ia+ ++t+ q+ s+ qky AUR62003725-RA 72 PWTKKEHRAFLEGLDMFGKGEWKSIAEIYVPTKTASQVASHGQKY 116 7**************************8888**********9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MFENALAELD VTSPDFYEKI MAIMPWKSLE QIKSHYGKLV ADTAMIEQDE TGGFGGDDNG 60 AKVDRKPCRG APWTKKEHRA FLEGLDMFGK GEWKSIAEIY VPTKTASQVA SHGQKYYRRL 120 KCRTPVEKRR SSIHDIRIVN SSIVETAPRQ PTRHSVIQRI PQSDNRNNNN KQDDVVVGQH 180 DSSNADPATA LNSINNINSQ IVVEDSLDDL DYDNLFADYD EIISDYNDIF I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 8e-30 | MYB family protein |