PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62003648-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 245aa MW: 28023.6 Da PI: 9.3186 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.5 | 4.8e-32 | 166 | 224 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ AUR62003648-RA 166 LDDGYKWRKYGQKVVKNTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 224 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 245 aa Download sequence |
MLNQSLMEDH HQVGLSSSQM GFYLNSTNLT SFSPPLVLNH QQQQSDDLKP LNNFLPSSFG 60 LDHVTCTLTQ ALLSSTKPRQ QEDYLSSSFT NNLPPLFSPQ KPTPNYNLWA AWGEGKEYQL 120 AGSKRGCNGD DPILGVSTVK MKKMKARRKV REPRFCFKTM SDIDVLDDGY KWRKYGQKVV 180 KNTLHPRSYY RCTQDNCRVK KRVERLAEDP RMVITTYEGR HIHSPSNDLD ESQGGQPQLN 240 NFFW* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39410.1 | 1e-52 | WRKY family protein |