PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62003583-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 225aa MW: 26274.3 Da PI: 5.1451 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 78.4 | 1.6e-24 | 14 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.........lelee...vikev.d.iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lp GfrF+Ptdeelv ++L+ k++ ++ + + i+e+ d ++++P +L+ ++ ++ +wyf++++ +nr+ ++g AUR62003583-RA 14 LPLGFRFDPTDEELVLHFLHSKLKLSSssrnypsnnC---NnphLIPELeDfFHHYHPCQLHGEAFESCGQWYFYTRKT--------ENRVSENG 97 699*******************998886666665443...0443699997645667*****9555455679****9874........58999*** PP NAM 82 yWk.atgkdkevlsk..kgelvglkktLvfy.kg.rapkgektdWvmheyrl 128 yW+ g d+++++ ++lvglkk Lvf kg a++g+k W+m+ey++ AUR62003583-RA 98 YWEeLVGMDQPIYAGnnCNKLVGLKKWLVFNnKGmYASSGVKNGWFMQEYHA 149 **945799*****97666778*********95346899************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MVENNENMLD MKQLPLGFRF DPTDEELVLH FLHSKLKLSS SSRNYPSNNC NNPHLIPELE 60 DFFHHYHPCQ LHGEAFESCG QWYFYTRKTE NRVSENGYWE ELVGMDQPIY AGNNCNKLVG 120 LKKWLVFNNK GMYASSGVKN GWFMQEYHAC SNNNLSKRRK SKQPAADVMN KWVLCRVQQV 180 CDESQWMNTF NEDKSNNEVE LSSSDEAVYL AMEENDEHEV TYPY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 1e-26 | NAC family protein |