PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62003400-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 574aa MW: 65093.7 Da PI: 5.8896

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62003400-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.7	7.6e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k++l evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v AUR62003400-RA 6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EVIAEVDLYKCEPWDLPsKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********5334455777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s + ++vg+kktLv+y+grap+g++t Wvmheyrl AUR62003400-RA 100 S-QLRAVGMKKTLVYYRGRAPHGHRTGWVMHEYRL 133 9.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MAPVALPPGF RFHPTDEELV AYYLKRKING RKIDLEVIAE VDLYKCEPWD LPSKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QLRAVGMKKT LVYYRGRAPH 120 GHRTGWVMHE YRLDERECEV VSGLQDAYAL CRIFKKTTPP TPPKIAPQYG YTTNMAQMSS 180 DQQSSSIDIY SEGRCDDFES SAYSVPIERS CTTNIFAQGH ASSSSSHRNM GDGQWLQYLN 240 DQDDFSFPTP AFHNSGSLPY PPSKVDIAIE CARLQHRFTL PPLEVEGSSN YGTTNLSNMG 300 MCYNNGGTST GGDILDEILS VAQAQQDLIS HPNTMIGGQS YNNHNYGDTM NNQANSMRPI 360 MENSWEDNMN TSLVGMGNVD ELKSERMVDF SDLVVFDERN SEKETREEYG MVPIENNSTL 420 FHGEHDIEDE LNKNFINDND IDNFSSTPSF EVFEEVEVNQ SLYISSQWLA ETRFHHVQPT 480 KTVQVYLQRA IGLRNTKKED SFEEVDNKNK SSFFDKLAGF ARNSIGKSTP KMFAKNRACC 540 YANKVERFAS SWLANRVWPS ITVVLALCMY HMG*

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MAPVALPPGF RFHPTDEELV AYYLKRKING RKIDLEVIAE VDLYKCEPWD LPSKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QLRAVGMKKT LVYYRGRAPH  120
GHRTGWVMHE YRLDERECEV VSGLQDAYAL CRIFKKTTPP TPPKIAPQYG YTTNMAQMSS  180
DQQSSSIDIY SEGRCDDFES SAYSVPIERS CTTNIFAQGH ASSSSSHRNM GDGQWLQYLN  240
DQDDFSFPTP AFHNSGSLPY PPSKVDIAIE CARLQHRFTL PPLEVEGSSN YGTTNLSNMG  300
MCYNNGGTST GGDILDEILS VAQAQQDLIS HPNTMIGGQS YNNHNYGDTM NNQANSMRPI  360
MENSWEDNMN TSLVGMGNVD ELKSERMVDF SDLVVFDERN SEKETREEYG MVPIENNSTL  420
FHGEHDIEDE LNKNFINDND IDNFSSTPSF EVFEEVEVNQ SLYISSQWLA ETRFHHVQPT  480
KTVQVYLQRA IGLRNTKKED SFEEVDNKNK SSFFDKLAGF ARNSIGKSTP KMFAKNRACC  540
YANKVERFAS SWLANRVWPS ITVVLALCMY HMG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-115	NAC family protein