PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62003365-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 28971.5 Da PI: 5.9778 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.3 | 2.1e-11 | 38 | 87 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f+eL + l + +K++Ka+iL+ A++ +++L AUR62003365-RA 38 RKVQKADREKLRRDRLNDQFQELGSALDPE----RPKNDKATILTDAIQILRDL 87 5677889********************997....69*************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDQWQTDKVC QPLNPSQSSQ FDSRQRPEAE VKDPVAVRKV QKADREKLRR DRLNDQFQEL 60 GSALDPERPK NDKATILTDA IQILRDLTAE VNKLKAECAT LSEESHELTQ EKNELREEKA 120 SLKSDIENLN AQYQQRLRVV YPWGAVESSV VMGPPYSYSL PMAVPPGSIP MHPSLQPYPF 180 FGSQNASTIP SPHPAFMPYP TPPNPHVEQQ PIQPASTSHV LSKPIKGSDS GKARHLERTD 240 DSSDVATELE LKTPGCGQR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 3e-83 | bHLH family protein |