PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62002702-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 384aa    MW: 41495.4 Da    PI: 4.9908
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62002702-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY52.11.3e-161772162159
                     -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      r+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  AUR62002702-RA 177 RRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 216
                     599*****998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MDNYLGDLAD IVRASGGNGI IGNHTTATAT TSDQFGLSNQ DSYQLIRNND AYSFPADTLL  60
RNIDAISTSS TTFLDNMGVD DGGQGGGRLA SGADGLVQQV TGPSQTPGII NNAAAASPKV  120
VKSAAAVGYR IMSNQMISMN NASCSSSPKG VFVDGSTTTA DVQQLQIPSP RNHGIKRRGY  180
YRCSSSKGCS ARKQVERSRT DPNMLVITYT SEHNHPWPTQ RNALAGSTRS SQPASKTSSK  240
ASSPPSQKPS NNKFRNILIK EENENASTTT ATTLSTVKEE ETKLYDDRLD SNKVDEIIES  300
YRPLILPEPK TSNGRDQQSD QDFFADLVEF ESDDPLEIFG TQGCKGFDSF SGLFDWATNN  360
NTPTNEENND HTTLSLDQEK FKR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.19e-30WRKY family protein