PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62002002-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CAMTA

Protein Properties

Length: 991aa MW: 111891 Da PI: 6.9087

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62002002-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175	1e-54	21	136	3	118
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 + ++rwl++ ei++iL+n+++++++ e+++ p+sg+l+L+++k++ryfrkDG+sw+kkkdgktv+E+he+LK g+++vl+cyYah+e+n++fqrr AUR62002002-RA 21 DAQHRWLRTPEICEILQNYKRFNIAPEPPNLPPSGALFLFDKKVLRYFRKDGHSWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEDNENFQRR 115 679****************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 +yw+L+ el++ivlvhy++vk AUR62002002-RA 116 SYWMLKDELSHIVLVHYRDVK 136 ****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 991 aa Download sequence
MAQTNHLEFG NQLDIEQILF DAQHRWLRTP EICEILQNYK RFNIAPEPPN LPPSGALFLF 60 DKKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWML 120 KDELSHIVLV HYRDVKGYRT TFNRFKETEK DIANTQIKQI VCNSEAESTL NSGLQQNCCP 180 MLSQNTDSRT PNSAQASDYE DAESGNQAKS TTVSSLEIDV DRPVQKHQNE LWGWEDVLEN 240 HNVRVQFASL ESSILNVQSD SVHTNSKQEN VITKLFLTDP CCNTQASRDL AQGPEEWQAM 300 HAMDYQTEPS VAACKEDQVD VESNLTGVKN SSHFSAARTL LDRPVKDETL KKSDSFSQWM 360 CKELEDVEPV KPSSGAYWDA DDKRSDCLNL PPQAEFDSYT VGPSLSQDQH FRIIDFAPNW 420 GYAGSETKVL ITGKFMKTRP DAENCQWSCM FGEVEVPAEV IADGALRCHA PPHCVGRVPF 480 YVTCSNRLAC SEVREFEYQD KIVHGLDATF FIQIKFCKLL SLGSSYRQNI VPCNGDGNSD 540 LDHEITSLLK GNDNEWFHIL ELSSKEEFSL GEVKDRLAEK LIKERLCEWL LCKRTEGGKG 600 PRVLDENGQG VLHFAAALGY DWAISLTVAA GVSINFRDVR GWTALHWAAY YGRERTVVYL 660 ISLGASAGAL TDPSPTYPMG RTPADLASEN GHKGISGFLA ESALSAHLEC LTLKDKFKQD 720 STVVEVLGMT SVLTATERTA TPISKGVNLD GLSLKDTLAA VCNASQAAAR IHQVFRSHSF 780 KRNQRKEFGN DKKETPDEYA LSVITLNSPK RGQHDEPVHA AAIRIQNKFR SWKGRREFIT 840 LRQKIVKIQA HVRGHQVRKH YKAFVWSVGI VEKVILRWRR KKSGLRGFKS ESLPVTKQQS 900 EGKSSEDDYD FLKEGRKQAE ERLQKALSRV KSMVRYPEAR DQYRRLLTTV TEIKEMKDGY 960 SNAIDGAYAA TSMGDDLVDL DRLLNDGTTP *

Sequence ? help Back to Top

Protein Sequence Length: 991 aa Download sequence

MAQTNHLEFG NQLDIEQILF DAQHRWLRTP EICEILQNYK RFNIAPEPPN LPPSGALFLF  60
DKKVLRYFRK DGHSWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWML  120
KDELSHIVLV HYRDVKGYRT TFNRFKETEK DIANTQIKQI VCNSEAESTL NSGLQQNCCP  180
MLSQNTDSRT PNSAQASDYE DAESGNQAKS TTVSSLEIDV DRPVQKHQNE LWGWEDVLEN  240
HNVRVQFASL ESSILNVQSD SVHTNSKQEN VITKLFLTDP CCNTQASRDL AQGPEEWQAM  300
HAMDYQTEPS VAACKEDQVD VESNLTGVKN SSHFSAARTL LDRPVKDETL KKSDSFSQWM  360
CKELEDVEPV KPSSGAYWDA DDKRSDCLNL PPQAEFDSYT VGPSLSQDQH FRIIDFAPNW  420
GYAGSETKVL ITGKFMKTRP DAENCQWSCM FGEVEVPAEV IADGALRCHA PPHCVGRVPF  480
YVTCSNRLAC SEVREFEYQD KIVHGLDATF FIQIKFCKLL SLGSSYRQNI VPCNGDGNSD  540
LDHEITSLLK GNDNEWFHIL ELSSKEEFSL GEVKDRLAEK LIKERLCEWL LCKRTEGGKG  600
PRVLDENGQG VLHFAAALGY DWAISLTVAA GVSINFRDVR GWTALHWAAY YGRERTVVYL  660
ISLGASAGAL TDPSPTYPMG RTPADLASEN GHKGISGFLA ESALSAHLEC LTLKDKFKQD  720
STVVEVLGMT SVLTATERTA TPISKGVNLD GLSLKDTLAA VCNASQAAAR IHQVFRSHSF  780
KRNQRKEFGN DKKETPDEYA LSVITLNSPK RGQHDEPVHA AAIRIQNKFR SWKGRREFIT  840
LRQKIVKIQA HVRGHQVRKH YKAFVWSVGI VEKVILRWRR KKSGLRGFKS ESLPVTKQQS  900
EGKSSEDDYD FLKEGRKQAE ERLQKALSRV KSMVRYPEAR DQYRRLLTTV TEIKEMKDGY  960
SNAIDGAYAA TSMGDDLVDL DRLLNDGTTP *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein