PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001913-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 359aa    MW: 38824.2 Da    PI: 5.8685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001913-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.92.8e-16118164455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L++l+P++      K +Ka++L +A+eY+k+Lq
  AUR62001913-RA 118 VHNLSEKRRRSRINEKMKALQSLIPNS-----NKTDKASMLDEAIEYLKQLQ 164
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MRSHAADQLP SFSTLFNNIS AGPSAVFSGS DRLAVNRISP ENGVVLPPST TGFPVPAGSN  60
LSSESLSGSV QLKSFDYNDF PEDNDCESEE GNDVAVEEGE TKQQQLRNQS KRSRAAEVHN  120
LSEKRRRSRI NEKMKALQSL IPNSNKTDKA SMLDEAIEYL KQLQLQVQML SMRNGVSLHP  180
MCLPGGQGIL HPSQLSQMGI DFDDASGSYD LNMTTALNTI PETSNTTLNL PNQCTSSVRP  240
SLATVPSPSI INSEAMSFGL ESCMPANFHP YQPRNPPQAV GRERSMPHER IGVNNIETKS  300
LGAVSTSTRL GHNSVQERMQ QKHAPQETCL ENISGQNQLV SSNFSGLFAA TSGAQMTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.15e-54bHLH family protein