PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001531-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 331aa    MW: 37171.1 Da    PI: 9.6626
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001531-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.57e-2957953128
             NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s +++++g+k+tLvf+ grapkge+t+W+mhey +
  AUR62001531-RA   5 KSDQEWFFFSPRGKKYPNGSQSKRATEIGYWKATGKERAVKS-GSNVIGTKRTLVFHIGRAPKGERTEWIMHEYCM 79 
                     4689*************************************9.99*****************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
KAIIKSDQEW FFFSPRGKKY PNGSQSKRAT EIGYWKATGK ERAVKSGSNV IGTKRTLVFH  60
IGRAPKGERT EWIMHEYCMS GKAQDALVVC RLRKKCDYHG LNNGPDGEMN QSPNPSMLMA  120
SSGTYSNCGM GLIDNNTPGR DKQTAECSFK KSSSSHDSHS VEQMDSASQS NWKNKDYIFQ  180
PESTSINHVG NEDDLFAEIL NDSIIQLDEC LPPSTFGAQP MVANNGTVPV VPLNFNNPSH  240
HHVVQRVYPA QGTANRRLRL RKLRRLSPRK EELEEGSGEN MVNSKSRRFF KAPQGWMRTS  300
KNCSRLYVLV ITMALLILMM VYATDPAYFY *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1256262RRLRLRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44290.12e-55NAC family protein