PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001522-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 269aa    MW: 30289.7 Da    PI: 8.7951
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001522-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM139.61.9e-4341291128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     lppGfrF Pt+eel+ +yL+++ +    el++vi+++diy++eP++Lp + ++ ++++w+fF+++++++a+g r+nr+t+sgyWkatg+   v+s
  AUR62001522-RA   4 LPPGFRFYPTEEELIAFYLHNSQRP---ELHRVIPSIDIYNFEPSQLPgELCHRDTEQWFFFTPQQEREARGGRPNRTTASGYWKATGSPSYVYS 95 
                     79*****************987554...45567***************555666777************************************** PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++++g+kktLvfykg+ap g+kt+W m+ey++
  AUR62001522-RA  96 SQNKVIGVKKTLVFYKGKAPIGRKTKWKMNEYKA 129
                     ********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEQLPPGFRF YPTEEELIAF YLHNSQRPEL HRVIPSIDIY NFEPSQLPGE LCHRDTEQWF  60
FFTPQQEREA RGGRPNRTTA SGYWKATGSP SYVYSSQNKV IGVKKTLVFY KGKAPIGRKT  120
KWKMNEYKAT KQQDFQTINA SSVTTSIPEL KHGLSLCRVY ITSGCARAFD RRPPGTISSD  180
LNTQNYQAIQ ASGKGSQSAN ATPLLMEKSS STDSFNSRCD DQGNVQEVGA GSSYNSEFEL  240
AEDGFLSDWK QLEDYWTEKG SGSIKRKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.15e-77NAC family protein