PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001365-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 308aa    MW: 35908 Da    PI: 5.4169
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001365-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.99.7e-37161512128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppG+rF+P+deel+++yL+kk++g+ l+  + ++e+++y +  P++L      ++e+ wyfF++ ++ y++g+r++r++ +gyWkatg d ++ +
  AUR62001365-RA  16 PPGYRFEPRDEELITHYLTKKINGEALPP-NKMHEAELYGMfGPEELTlYYEPESENTWYFFTRLERLYKNGSRPRRSAGNGYWKATGVDATISN 109
                     9*************************999.77*****998659****9434445677************************************** PP

             NAM  95 kkgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                     k+g ++g +k L+f+        ++++pkg kt W+mhe+rl
  AUR62001365-RA 110 KQGITIGYRKALAFFikiepapkNKNEPKGIKTPWLMHEFRL 151
                     ***************99999887689**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDSLSNETEN YWNIIPPGYR FEPRDEELIT HYLTKKINGE ALPPNKMHEA ELYGMFGPEE  60
LTLYYEPESE NTWYFFTRLE RLYKNGSRPR RSAGNGYWKA TGVDATISNK QGITIGYRKA  120
LAFFIKIEPA PKNKNEPKGI KTPWLMHEFR LNNIPSTSEP KPKRLKTNDH DGTSQSQGSK  180
PKNMLDGWVL CKVYRVARDV EVEAINQEEQ HLHQEEQHQA IALNIGANDH VLIPAIEDSF  240
EHLQRNRQEE QHLQQEEQHQ AIALNNGDNH HLLIPEIEDS FEHQQRNEDM PRFSQEELEF  300
LYNIFPC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.15e-37NAC family protein