PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62001271-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 998aa MW: 111182 Da PI: 5.1446 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.7 | 2.8e-15 | 61 | 151 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ +l s +l +p +fa++ e+k led++g++W+v+l ++ g+ ++kGW +F ++g++ gD vvF++ + s+f v AUR62001271-RA 61 FFKVM--FGNLFSEILFVPPRFAKTViA---LEGKYTYLEDPTGQKWKVNL--SNVNGSLAFEKGWHDFSVDHGIELGDLVVFHYFKGSNF--IV 146 56666..556777889*******98853...245689**************..999999*************************9987888..99 PP EEE-S CS B3 95 kvfrk 99 ++f + AUR62001271-RA 147 QIFGR 151 99987 PP | |||||||
2 | B3 | 33.5 | 7.5e-11 | 431 | 511 | 18 | 97 |
--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS B3 18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 lpk+ ++ +g++ e+ + l+d+ r W v + +++g+ vl++GWkeF kan + gD ++F +++ ++ ++ v ++ AUR62001271-RA 431 LPKPLPLKIcrQGDSLEQNLVLLRDPLQRLWPVIY--HQRKGSEVLANGWKEFRKANCIHPGDECTFVVENIdEGSHFIVEIY 511 55555445555455566779***************..77778889**********************9775546666666665 PP | |||||||
3 | B3 | 40 | 7e-13 | 928 | 987 | 32 | 93 |
--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 32 esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ++k ++l+d+ gr W v + k+ + +vl++GWkeF kan++++gD + F ++ +++ + AUR62001271-RA 928 KHKLISLKDPAGRDWPVLY--HKRNNLFVLASGWKEFRKANKICTGDECAFVAEKIDKGAFQ 987 5679***************..999999************************96644555444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 998 aa Download sequence |
MSSAVLANRL QTSFMMADYV SPAVYSHVVM GDKGEACAEC SRSCSSFHRT MHDPYPIVSS 60 FFKVMFGNLF SEILFVPPRF AKTVIALEGK YTYLEDPTGQ KWKVNLSNVN GSLAFEKGWH 120 DFSVDHGIEL GDLVVFHYFK GSNFIVQIFG RSGCEKPMIY SGMDYQNKRA KLTRTDPCDS 180 LHNKESTPAK KCLDSGMETG PNVDVHNVEK SPEIRVNVSR EGNINKQPEE VPTADPLVES 240 LFISDKYINC TSEDSRIDLY DLSVFEMPGN KADADKISTL MEYTCSEVPS ALQKNQSEEV 300 SPENFQITET MNETSNEEDA SRKECLPLLN NTVSGAEVPL DIYMPLKSVT LPHAPEFSSP 360 AAPVDEILFT TKGQKVKKED IGSHSTSMGK NKGRIDMIVK LEEPEFCDTP SAQDIKITCL 420 VQQGNESFLE LPKPLPLKIC RQGDSLEQNL VLLRDPLQRL WPVIYHQRKG SEVLANGWKE 480 FRKANCIHPG DECTFVVENI DEGSHFIVEI YGKSGYEKSF PSVKSYQNKR PKTTGDSPSD 540 PSYKEREPSQ KNNCFNTYAV PRSNTYMDDI SWSQDDVNNL NDSPVMEENV QRQVNVIEKP 600 QLVPDVDILV EPCFLNDRET NTAKEANREH LFDLSAFESP GMNPSSSRKG DDDNRFDLSI 660 SNMTSKKLDA REDLGEHLSD QPPFQSFNIE PSFSMNGNRD DISNPSTSKM IDKKVDDHKG 720 NLQGNTCSQV SGAFDEARTR STSIDTKKFP LTQGKTAVPS NNDEANLSSS KHSPVPSVSP 780 ILPSNLMPPP NLFGKKQTCE PSTTSGFSQS PGSNSVCGRE GGTVRVVKQE PREFKQDLSA 840 NLLAGTSFVA SLSFNREAKS NFSGLGVNNP MEDDVEVCKD VKAEPVDFCD SLSVPAGRII 900 CSVPPDNESF LELPEALPIK WRQRLDKKHK LISLKDPAGR DWPVLYHKRN NLFVLASGWK 960 EFRKANKICT GDECAFVAEK IDKGAFQLLI LNRIRCP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18960.1 | 4e-14 | B3 family protein |