PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62001169-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 542aa MW: 59031.7 Da PI: 7.5353

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62001169-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.9e-09	358	405	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq AUR62001169-RA 358 SHSLAERVRREKISERMKLLQDLVPGC----DKVTGKALMLDEIINYVQSLQ 405 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MEKEFFLNTG IPPSLHFDHP FSSSTMPTWQ ALSSAMELQS PDCFLSTPPP TSANDNFESA 60 LSSMVSSPAA SNPALSNDNF MIRELIGKLG NICSSGDVSG GGHHALPPYI GSGGGNRSAS 120 NSCYSTPLSS PPKMGVSLSN LDHLVNDKFP TLGNSVGLRS NLPAMPGDPG FAERAARFSS 180 FGSRSFNGRT SQYIVNNNHK SHNRSNDSNN EFIHRSNSKL TRVLSSPSLL KEVENQGDEK 240 LKIERKQGEM CGNDHGEFSN SRENSSVSGQ NPAPENGSTK KRKAPAPKGK TKDTLPQSPL 300 HTNKVSQNGE DSTAKRSKSE EGGVLKTEEN RGDANQKPPE APKDYIHVRA RRGQATDSHS 360 LAERVRREKI SERMKLLQDL VPGCDKVTGK ALMLDEIINY VQSLQRQVEF LSMKLSSVNP 420 RLEFNMGNLF SKDVIQPNNS LPHPMYPLDS LAPSLYGQPH QNHPLQDSIT TTAPSSMDPS 480 HNQNHPLHLH SLDAFSNGLP QLPSLCEGDL QSIVQMSYGQ KENGFQQQHG SNPSPLMKIE 540 F*

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MEKEFFLNTG IPPSLHFDHP FSSSTMPTWQ ALSSAMELQS PDCFLSTPPP TSANDNFESA  60
LSSMVSSPAA SNPALSNDNF MIRELIGKLG NICSSGDVSG GGHHALPPYI GSGGGNRSAS  120
NSCYSTPLSS PPKMGVSLSN LDHLVNDKFP TLGNSVGLRS NLPAMPGDPG FAERAARFSS  180
FGSRSFNGRT SQYIVNNNHK SHNRSNDSNN EFIHRSNSKL TRVLSSPSLL KEVENQGDEK  240
LKIERKQGEM CGNDHGEFSN SRENSSVSGQ NPAPENGSTK KRKAPAPKGK TKDTLPQSPL  300
HTNKVSQNGE DSTAKRSKSE EGGVLKTEEN RGDANQKPPE APKDYIHVRA RRGQATDSHS  360
LAERVRREKI SERMKLLQDL VPGCDKVTGK ALMLDEIINY VQSLQRQVEF LSMKLSSVNP  420
RLEFNMGNLF SKDVIQPNNS LPHPMYPLDS LAPSLYGQPH QNHPLQDSIT TTAPSSMDPS  480
HNQNHPLHLH SLDAFSNGLP QLPSLCEGDL QSIVQMSYGQ KENGFQQQHG SNPSPLMKIE  540
F*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	3e-74	bHLH family protein