PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62001007-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 300aa    MW: 31230.3 Da    PI: 6.9673
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62001007-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.2e-10148192554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K + a++L + v+Y+k L
  AUR62001007-RA 148 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 192
                     99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MANNQPHHHH HEGLGDEFFE QILSVPGYNT GGGSDGGGFV GGGSGGGDGS SILLGLGPGD  60
GSGHGGVNVG LGISGFRGGM GLGLPLGLNL DHAFGQLQHQ SLRPAPPSIQ VHRTFQGHTA  120
PGPAPPMSHP PAIRPRVRAR RGQATDPHSI AERLRRERIA ERMKALQELV PSCNKTDRAA  180
MLDEIVDYVK FLRLQVKVLS MSRLGGAGAV AQLVADVPPS SAEGEGVDGA QAAWEKWSSD  240
GTEQQVAKLM EQDIGAAMQF LQSKALCIMP VSLASAIFRS QPPPPDPPAI IKPEANPPP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153158RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.38e-54bHLH family protein