PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62000898-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 419aa MW: 46498.1 Da PI: 6.9494

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62000898-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.6	4.6e-27	27	176	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppG+rF+P deel+ +yL++k++g+ l+ + ++ev+iy +P+ + +++ a++ +wyfF++r+k y++g r++r++++g Wka + ++++k AUR62000898-RA 27 PPGYRFNPYDEELILYYLNPKINGQVLPP-NRMHEVNIYANHPSVITRCYPAQDGRWYFFTPREKMYPNGGRPKRSASNGKWKAISRPFDITDKr 120 9***********************999.77**********988889999***********************************997 PP NAM 96 .......kgel..................vglkktLvfykg.rapkgektdWvmheyr 127 k + kktL k+ +++k+ t W m ey AUR62000898-RA 121 ygilighK--RilayeeigdsnektlnhkKKSKKTLSHKKKdDDSKPITTIWGMYEYW 176 44443320..023333333333334444455555555553325556667777777775 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MKEEQHNDQS SDDPANERQL DFFNNFPPGY RFNPYDEELI LYYLNPKING QVLPPNRMHE 60 VNIYANHPSV ITRCYPAQDG RWYFFTPREK MYPNGGRPKR SASNGKWKAI SRPFDITDKR 120 YGILIGHKRI LAYEEIGDSN EKTLNHKKKS KKTLSHKKKD DDSKPITTIW GMYEYWIHES 180 SEILQLKKDY PSTRLDYVLC IIYKKENKGK GRKKSKNSPL VATDKKEGQL VLNDKRAENA 240 AVGTTIEHPC TSLPIPSAFE VGSTSSSTIN LAENAAVGTI IGHPCTSLLI PSAFEVGSTS 300 SSTINLAENA AIGTIIGHPC TSLLIPSAFE VGSTSSSGSI KPAENVDVGT TIEHPCTSSS 360 MPSTFEVGST SNSTINEYPG HTSMPSTFEV GNTSSNTNNA TYNFDDIMMD LSWLNEYI*

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MKEEQHNDQS SDDPANERQL DFFNNFPPGY RFNPYDEELI LYYLNPKING QVLPPNRMHE  60
VNIYANHPSV ITRCYPAQDG RWYFFTPREK MYPNGGRPKR SASNGKWKAI SRPFDITDKR  120
YGILIGHKRI LAYEEIGDSN EKTLNHKKKS KKTLSHKKKD DDSKPITTIW GMYEYWIHES  180
SEILQLKKDY PSTRLDYVLC IIYKKENKGK GRKKSKNSPL VATDKKEGQL VLNDKRAENA  240
AVGTTIEHPC TSLPIPSAFE VGSTSSSTIN LAENAAVGTI IGHPCTSLLI PSAFEVGSTS  300
SSTINLAENA AIGTIIGHPC TSLLIPSAFE VGSTSSSGSI KPAENVDVGT TIEHPCTSSS  360
MPSTFEVGST SNSTINEYPG HTSMPSTFEV GNTSSNTNNA TYNFDDIMMD LSWLNEYI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	6e-22	NAC family protein