PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62000800-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NF-YB | ||||||||
Protein Properties | Length: 182aa MW: 20010.8 Da PI: 6.0326 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 157.9 | 1.6e-49 | 3 | 98 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 e+dr+lPianv+rimk++lP akisk aket+qecv+ef+sfvt+easdkc++e+rkt+ngdd++wal+tlGf+++ e+++ yl+kyre+e+ek AUR62000800-RA 3 DETDRLLPIANVGRIMKQILPPSAKISKGAKETMQECVTEFVSFVTGEASDKCHKENRKTVNGDDIYWALSTLGFDNHGEAITRYLHKYREFEREK 98 689******************************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MVDETDRLLP IANVGRIMKQ ILPPSAKISK GAKETMQECV TEFVSFVTGE ASDKCHKENR 60 KTVNGDDIYW ALSTLGFDNH GEAITRYLHK YREFEREKAC QGKGGEESGV VLLGVVGGRG 120 SSSSTEERDH NEETTTKFGS HGGGRDXXXX XXLDVENSGF PLEFRIIDPK GKSPFRNNNS 180 S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09030.1 | 6e-54 | NF-YB family protein |