PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62000606-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 245aa MW: 27681.8 Da PI: 8.2943 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 94.7 | 7.4e-30 | 32 | 84 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + YkeClkNhAaslG+h++DGCgEfmp +g+ +a+ C+ACgCHRnFHR+e++ AUR62000606-RA 32 MILYKECLKNHAASLGSHSTDGCGEFMPP---SGDNDAFLCSACGCHRNFHRKEEV 84 678*************************9...5678*****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MSDSSTQAGD EHNTILTTKK YENGRSNSKE MMILYKECLK NHAASLGSHS TDGCGEFMPP 60 SGDNDAFLCS ACGCHRNFHR KEEVEVAHVG SNNYTYLSYY HYQRNTSNIT KNQVQECHQD 120 KVTALTARHG SHNSPSLNVG PAATPSENDG EQIMVEGMKM SKKRHRTRFT NEQKEKMLGF 180 AQKTNWKIQR VDEGLVQQFC QEVGIKRRVL KIWMHNNKYL FVKKGTNSTL NDHDASDSSD 240 KLNE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.1 | 8e-52 | ZF-HD family protein |