PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62000536-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28246.9 Da PI: 8.7112 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 96.9 | 3.1e-30 | 5 | 77 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + ++ g+kk Lvfy g+apkg+kt+W+mheyrl AUR62000536-RA 5 GEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKTLGIKKALVFYAGKAPKGVKTNWIMHEYRL 77 579************************************98..778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MALYGEKEWY FFSPRDRKYP NGSRPNRAAG TGYWKATGAD KPIGKPKTLG IKKALVFYAG 60 KAPKGVKTNW IMHEYRLANV DRSAGKRTNL RLDDWVLCRI YNKKGVIEKD YSIDQNSKPM 120 SMPNSMAQYS DFEDQKPNIS TPGQTVPMGY MTPSPIPPAK NDLLHFDTSD SVPRCHTDTS 180 GSNHVASPEF MCDKEVQSDP KWNELGKNNL DFPSFNYMDP FPEDPFASTA QFQNDQMTNF 240 QDIFMLLR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 9e-85 | NAC family protein |