PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000492-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 328aa    MW: 36465 Da    PI: 5.0039
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000492-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1546.9e-48111382128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ppG+rF+Pt+eelv++yLk+kv gk+l+  ++i+e+d+yk+ePwdLp  +++k++++ wyfF++r+kky++g+r+nr++++gyWk+tg dkev+ 
  AUR62000492-RA  11 PPGVRFQPTNEELVMYYLKRKVLGKSLSRPQMISELDVYKFEPWDLPemACLKTKDRYWYFFCPRSKKYPSGNRSNRVANKGYWKSTGVDKEVKY 105
                     9**************************99999**************95448899999************************************** PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k++ vg  k Lvf++g++p+g +t+Wvmhey l
  AUR62000492-RA 106 -KERCVGKIKHLVFHSGKSPNGARTNWVMHEYVL 138
                     .8999***************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MKGSLGVKSF PPGVRFQPTN EELVMYYLKR KVLGKSLSRP QMISELDVYK FEPWDLPEMA  60
CLKTKDRYWY FFCPRSKKYP SGNRSNRVAN KGYWKSTGVD KEVKYKERCV GKIKHLVFHS  120
GKSPNGARTN WVMHEYVLND TLLADKGVPQ DSYAICKIFE KSGAGPKNGE EYGARFVEEE  180
WDSDTDDNVQ ERTPGLVSCD MSFGTPAVMG TPNIAATTSN TSTVMGIPYT AATTSSTTTA  240
VMSVPYLAAP TSSTTTSTGT PYISATTPLD VPIAAPLSLD VSEEDEVDRL LQHFTDDAED  300
FEDIFQGLED LDNSFIEMND LIRHTKN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.11e-70NAC family protein