PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62000311-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 707aa MW: 77103.4 Da PI: 6.4699

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62000311-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.5	1.2e-32	242	299	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ d++++ei+Y++ Hnh+k AUR62000311-RA 242 EDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSH-DGQITEIIYKNAHNHPK 299 8**************************************.*************85 PP
2	WRKY	102.1	3.1e-32	457	514	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+vers++ +++ +tYeg+Hnhe AUR62000311-RA 457 EDGYRWRKYGQKVVKGNPNPRSYYKCTTPGCTVRKHVERSSRSLRFILVTYEGKHNHE 514 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MLLMENSEEE LEEWRDIMMS SKGIFSGFGP EKCGCKSIDE FLNGGEGSFG CDDGLETSVE 60 KSLKFDNGSN SLMGVDDNSS VIKTGVSIAQ RRANKRGLNA SKLCSPRVRT NSLWPYSSES 120 CSPYVTVSTN ISPRTLLESP MLLPNSQLSP TTGSFASRPL DGDGQMLISA SSVDADKGSD 180 GSSSALFKPH TETTSLSDFH DVNNQMLHKN GSSMGDDSRI HDSLDGNQNG IYSHPGTSRT 240 AEDGYNWRKY GQKQVKGSEY PRSYYKCTYP NCPVKKKVER SHDGQITEII YKNAHNHPKP 300 QPSRKSTLGS LPFNETADLG DGSGLCMKVN NGPVWRSIQS GYKDVTGSDW RIDGLETSPT 360 SALTEVSDPL STTQGKPMGV LGSAGTPEFS SAMVSHEDDE EDATAQGRFL IEHEGENGSD 420 LKRRKKDGYF AETTLGSRAV REPKVVFETE TDADILEDGY RWRKYGQKVV KGNPNPRSYY 480 KCTTPGCTVR KHVERSSRSL RFILVTYEGK HNHEVPAARN SAHANSGSGS LTAAATSTQP 540 SLALPRNSHL PKPEPHAQDL PLHFNTNIGC SNDIFRSKYI CNLGAGTPPY YPIKLPALPN 600 TTPYGPFGLS TNHPAYANNM VPAIPELSFP PPLAFPCSIA SCCNPDRSHS TVPSLYAGQQ 660 LDESDVKFLR PKQEQKDDSF ETDMNSFDHT NVSSSTYNHV LGNFGS*

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MLLMENSEEE LEEWRDIMMS SKGIFSGFGP EKCGCKSIDE FLNGGEGSFG CDDGLETSVE  60
KSLKFDNGSN SLMGVDDNSS VIKTGVSIAQ RRANKRGLNA SKLCSPRVRT NSLWPYSSES  120
CSPYVTVSTN ISPRTLLESP MLLPNSQLSP TTGSFASRPL DGDGQMLISA SSVDADKGSD  180
GSSSALFKPH TETTSLSDFH DVNNQMLHKN GSSMGDDSRI HDSLDGNQNG IYSHPGTSRT  240
AEDGYNWRKY GQKQVKGSEY PRSYYKCTYP NCPVKKKVER SHDGQITEII YKNAHNHPKP  300
QPSRKSTLGS LPFNETADLG DGSGLCMKVN NGPVWRSIQS GYKDVTGSDW RIDGLETSPT  360
SALTEVSDPL STTQGKPMGV LGSAGTPEFS SAMVSHEDDE EDATAQGRFL IEHEGENGSD  420
LKRRKKDGYF AETTLGSRAV REPKVVFETE TDADILEDGY RWRKYGQKVV KGNPNPRSYY  480
KCTTPGCTVR KHVERSSRSL RFILVTYEGK HNHEVPAARN SAHANSGSGS LTAAATSTQP  540
SLALPRNSHL PKPEPHAQDL PLHFNTNIGC SNDIFRSKYI CNLGAGTPPY YPIKLPALPN  600
TTPYGPFGLS TNHPAYANNM VPAIPELSFP PPLAFPCSIA SCCNPDRSHS TVPSLYAGQQ  660
LDESDVKFLR PKQEQKDDSF ETDMNSFDHT NVSSSTYNHV LGNFGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	8e-91	WRKY family protein