PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000088-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 298aa    MW: 32931.6 Da    PI: 8.1257
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000088-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.7e-13235280655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  AUR62000088-RA 235 SIAERVRRTRISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKELQ 280
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MMYHSQSKPP LSNHHNTAVS SAMQNTFRAA AASSMGIDSI PHMKTGIGGG INNSNSGLTR  60
HSSSPAGFFA NLNIDTAGYG MMGGMRNYGG SNVQVNYSSG QPSSTSELVN QNSDVGAKRL  120
RMNSLDERKF SNSGNNPNDD SNYDFPMNSW DDSILSENFS GLDRVADEDI KVFPELNASE  180
NQDGEIKNRP PPLTHHLSLP KTLPELSNME RFLHFQDSTP LRIRAKRGCA THPRSIAERV  240
RRTRISERMR KLQDLVPNMD KQTNTADMLD LAVDYIKELQ KHVENLADNR AKCTCSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-57bHLH family protein