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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NF-YC | ||||||||
Protein Properties | Length: 129aa MW: 14322.8 Da PI: 8.4883 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 105.7 | 3e-33 | 17 | 98 | 18 | 98 |
NF-YC 18 nhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 h+lPlarikki+k + edvkmisaeaP+++skacelfi elt rsw+ a ++k+r l+k d+a+a+ tdifdfl+ + + XP_023552994.1 17 PHSLPLARIKKIMKkSGEDVKMISAEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKEDVASAILATDIFDFLIGLIFH 98 599**********73579**********************************************************987765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MRQAGAYSGV TYWKTGPHSL PLARIKKIMK KSGEDVKMIS AEAPIVFSKA CELFIEELTK 60 RSWMIAMQSK KRMLHKEDVA SAILATDIFD FLIGLIFHET TTPAASAAGD LAESETMSIP 120 VEMRPFLQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 7e-33 | NF-YC family protein |