![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023547243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 140aa MW: 15717.1 Da PI: 9.1988 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 54.2 | 3.1e-17 | 11 | 91 | 18 | 97 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt.difdflvdivp 97 + e+P+ rikki+k d+d+ ++ +ea l+s a elf+ l+ +s a e+kr+t+k i av+r i dfl+d p XP_023547243.1 11 RPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAAEKKRKTVKLEHIRIAVKRHqSISDFLLDSLP 91 568**********************************9999*************************9862588*****987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 140 aa Download sequence |
MAEKESGEAI RPEFPMGRIK KIMKLDKDIG KVNSEALFLV SCATELFLEL LAEKSSEVAA 60 EKKRKTVKLE HIRIAVKRHQ SISDFLLDSL PLPSQPSDAP AKDENRTRVV VDKVAPEGTR 120 RIDDFFRRPA KTASAEINET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G43250.1 | 2e-40 | NF-YC family protein |