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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023546645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 451aa MW: 50760.9 Da PI: 8.4719 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 126.8 | 8.5e-40 | 150 | 226 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ d+s++k+y+r+h+vCe hsk+p+v++ g e+rfCqqCsrfh++sefD +krsCrrrL++hn+rrrk+q+ XP_023546645.1 150 CQVEGCNIDISNIKDYYRKHRVCESHSKSPKVIIGGFERRFCQQCSRFHSISEFDGKKRSCRRRLSNHNARRRKPQS 226 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 451 aa Download sequence |
MEWNARPPLQ WDWDNLTVLN PRYSEHAGDD RTTGGPFFKL GQTSPKISKS VSTNSSSFEK 60 SRTTKFTLEG FEPTLEDSCN KKEFVEAEVV STYGTPETST CSCEPMLSLK LGKQAYFENA 120 SAVNLTKPSA LMVESRATRK RCQNTPSAHC QVEGCNIDIS NIKDYYRKHR VCESHSKSPK 180 VIIGGFERRF CQQCSRFHSI SEFDGKKRSC RRRLSNHNAR RRKPQSKVVS LNPARLSSWD 240 FENRQIDIFS DKLSLIYPTP NEKSAWESAF SSRHPQCGKY VSKPEPTYGS IGQLNVSGDE 300 MCYVHAMPYH DNTSKAVPFK GAATKILDPE GYVIPSNLNS AQDLQRALSL LSTDTKGPYE 360 ARLFAPDNPN RLVNPNYANQ PSISQSPMNL GIQTLPFASV DSQSWGNGHH HPIELQMQIH 420 HPNIEGGNNL FQDFQLFKTP CEIGMFSNQI S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 223 | KKRSCRRRLSNHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 4e-45 | SBP family protein |