![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023542434.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 213aa MW: 24269.5 Da PI: 10.2053 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 104.5 | 6.6e-33 | 3 | 59 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 + Y+eClkNhAa++Ggha+DGCgEfmp +++ +++++l+CaACgCHRnFHRre+++ XP_023542434.1 3 IYYRECLKNHAATVGGHALDGCGEFMPLLTATpSDPTSLNCAACGCHRNFHRREPDD 59 57**************************99999********************9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 213 aa Download sequence |
MFIYYRECLK NHAATVGGHA LDGCGEFMPL LTATPSDPTS LNCAACGCHR NFHRREPDDS 60 WQNLPTHRRF QSYRLCTPPS PKPQSPSSPI PLQISHIPPP VHFSAPHMLL ALSTGAAAQE 120 QRGGRFNPKQ RKRNRTKFSR DQKQKMRSFS EKMGWKIGKC DERLVEEFCN EIGIGKRVLR 180 VWMHNNKYMG GRTEKNRDSQ SSENGRDDSK QSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69600.1 | 2e-57 | ZF-HD family protein |