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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023541474.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 552aa MW: 60823.1 Da PI: 8.0842 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 135.3 | 1.9e-42 | 177 | 253 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh lsefD++krsCr+rLa+hnerrrk+q XP_023541474.1 177 CQVYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQV 253 **************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 552 aa Download sequence |
MESWNYGSQG KGFLSDEMNS STNSLLKSKY SLLGWEFKNP CSFGDNILLS GGAQHVENQS 60 FGELEFPLMV GKQLPDDSFS DVLNTKIDGG RSLNLVLPTS HPLPGEEEST SKLSGSIVDS 120 NNRDSSLIDL KLGRFIDTGD AHSFKYSKRA AISSSTESST SYKKMRSQGV NFLTPFCQVY 180 GCNKDLSSSK DYHKRHKVCE VHSKTSKVIV NGIEQRFCQQ CSRFHLLSEF DDGKRSCRKR 240 LAGHNERRRK PQVSFHSGRA QRLLQPYNGN GDRRFQEKAL GATSFICKDI LSSGVYYPEK 300 LGKNDWCKRI KVEGKNDYNS MCATSVGDRL LNMKSPLLPY DFEVQIPCFQ GNGSNAAVTE 360 NMLCDTSCQY SHNVGGLHMD THPLFHHTNL SSENFGVYDA ASTIQGVSGN PDYGCALSLL 420 SSHSQNASTH PSIVHVPRAF TMSKSRSNYS MSELSEKLMG VSSQASSTGI SSKFASGMSE 480 AQMVPIMTGE SSDHSVTFQI TDGVLHGSGL GNAKANLSYE HTPTMDLLQL SSQLHRVEHQ 540 RHSMQVHGGL CK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 4e-50 | SBP family protein |