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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023541176.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 445aa MW: 49860.1 Da PI: 8.9224 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.5 | 1.2e-40 | 161 | 237 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dls+ak+y+r+h+vCe hsk+p+v++ g+e+rfCqqCsrfh +s+fDe+krsCrrrL++hn+rrrk+q+ XP_023541176.1 161 CQVEGCNIDLSNAKDYYRKHRVCESHSKSPKVIIGGIERRFCQQCSRFHGISDFDEKKRSCRRRLSNHNARRRKPQS 237 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MEWNARPSLQ WDWENLTVLN PRISGHGDIL HPTNFENKHG INVGSSNSVG DARITGGPFF 60 ELGKTSPKNS KSVSQNSLSI EKSRTTKFTL EGFEPTLEDI DNKYKFVETS ICSCEPMLSL 120 KLGKQAYFEN TSAGNVKKPS VPLMESQATR KRCQNTPSPH CQVEGCNIDL SNAKDYYRKH 180 RVCESHSKSP KVIIGGIERR FCQQCSRFHG ISDFDEKKRS CRRRLSNHNA RRRKPQSKVI 240 SLNPARLSSW DFVERRQIDV FSDKLSLIYP ISRTNSAWES ELNTRHPQCG QYVLKSEQAC 300 GSTGQLNVSR NEMRCVRAMP YHDTSKLVTF KGPATRVLDA AQDLQRALSL LSTDLKGPYE 360 AKLISSDSPN SLSNPNYANQ TATSQSPMDL GIQSLPFASV DSGWPIESQV QVQVQVHHPS 420 NEGSGLLQDL QLFKTPCEIG MFSNS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 217 | 234 | KKRSCRRRLSNHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27360.4 | 3e-46 | SBP family protein |