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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023541125.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 159aa MW: 17415.8 Da PI: 6.8631 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129 | 1.8e-40 | 77 | 153 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+++C+adls k+yhrrhkvCe+h+kap+v+v+g++ rfCqqCsrfh l efD +krsCr+rLa+hn+rrrk+++ XP_023541125.1 77 CQADNCNADLSGSKRYHRRHKVCEFHAKAPAVVVAGIHXRFCQQCSRFHGLMEFDLTKRSCRKRLAGHNQRRRKSSS 153 **************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MVTGKADGKR RLNYYDAEED EDEEEEDEEE DGDGELGFGE DFNKKKKIVG GDGSSNKGSG 60 SGYGGAAAAV VAVAPSCQAD NCNADLSGSK RYHRRHKVCE FHAKAPAVVV AGIHXRFCQQ 120 CSRFHGLMEF DLTKRSCRKR LAGHNQRRRK SSSDVHGES |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 151 | QRRRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 6e-39 | SBP family protein |