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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023540567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 368aa MW: 39478.2 Da PI: 8.5678 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 138.2 | 2.5e-43 | 92 | 167 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC++hsk p+v+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_023540567.1 92 RCQVEGCKVDLSDAKAYYSRHKVCTMHSKFPKVIVAGIEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 167 6*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MRFRGFFFIV LMEMDCSSLT ESGGSTTSSP PISSAESLNG LKFGHKIYFE DVGIGELPKS 60 GGGSFSSSAV IASTPTKKPR GGGVVQAAQP PRCQVEGCKV DLSDAKAYYS RHKVCTMHSK 120 FPKVIVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG SLLSTRYGRF 180 SSSIFENSSR VGSFLMDFSA YPKLTGKASE RLPGSQNISA MGSYIPYPWQ SNSENSSPEL 240 FLPVSAGPGN EVTDSSCALS PLSNQTSALE VNALLNAEGA LVAQTASAHA AAAAAADHFS 300 TVSWGFKGNE AAATSSSSLD LPSDLGLNHH GLTSDVQFVS HQGRRPYMEL GHSGAFDSAT 360 QHQLHWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57920.1 | 1e-53 | SBP family protein |