PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540567.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SBP
Protein Properties Length: 368aa    MW: 39478.2 Da    PI: 8.5678
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP138.22.5e-4392167176
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                     +CqvegC++dls+ak y++rhkvC++hsk p+v+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+
  XP_023540567.1  92 RCQVEGCKVDLSDAKAYYSRHKVCTMHSKFPKVIVAGIEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 167
                     6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MRFRGFFFIV LMEMDCSSLT ESGGSTTSSP PISSAESLNG LKFGHKIYFE DVGIGELPKS  60
GGGSFSSSAV IASTPTKKPR GGGVVQAAQP PRCQVEGCKV DLSDAKAYYS RHKVCTMHSK  120
FPKVIVAGIE QRFCQQCSRF HQLPEFDQGK RSCRRRLAGH NERRRKPPPG SLLSTRYGRF  180
SSSIFENSSR VGSFLMDFSA YPKLTGKASE RLPGSQNISA MGSYIPYPWQ SNSENSSPEL  240
FLPVSAGPGN EVTDSSCALS PLSNQTSALE VNALLNAEGA LVAQTASAHA AAAAAADHFS  300
TVSWGFKGNE AAATSSSSLD LPSDLGLNHH GLTSDVQFVS HQGRRPYMEL GHSGAFDSAT  360
QHQLHWSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.11e-53SBP family protein