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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023533426.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ZF-HD | ||||||||
Protein Properties | Length: 306aa MW: 33219.2 Da PI: 8.5069 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 108.3 | 4.2e-34 | 67 | 123 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 v+YkeClkNhAa+lG+ha+DGCgEfmps++++ +++++lkCaACgCHRnFHRr++ee XP_023533426.1 67 VTYKECLKNHAATLGAHALDGCGEFMPSPSSTpTDPTSLKCAACGCHRNFHRRDPEE 123 89*****************************99********************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MFREVCVFER AMDLAPAAPI TTTNNTKSPD PDTDNTPTTI PPPSAKSPPF TNGLLKRHHA 60 QQHPPLVTYK ECLKNHAATL GAHALDGCGE FMPSPSSTPT DPTSLKCAAC GCHRNFHRRD 120 PEEPISTLAI NSAPTHVIEY QPHHRHHPPP PPLAGSWSPN SASPPPISSS YYPSAPHMLL 180 ALSAGLSGPP PENAQRSPNG RKRFRTKFSN EQKEKMLDLA ERVGWKMQKR DEDLVRDFCN 240 EIGIERGVLK VWMHNNKNTM GKKTDTNGAT TTTPTATAAA AVNNNENRAD AGLHMHIGSN 300 GSSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 5e-60 | ZF-HD family protein |