![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023532307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 195aa MW: 21185.9 Da PI: 5.979 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 132.8 | 1.3e-41 | 35 | 134 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaC++lrr+Ca +Cvlapyfp ++p+kfa++h++FGasn++k l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q++ l+a+la XP_023532307.1 35 PCAACRILRRRCAGGCVLAPYFPPTEPAKFAIAHRVFGASNIIKCLQELPESQRADAVSSMVYEANARIRDPVYGSAGAICQLQKQVNDLQAQLA 129 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_023532307.1 130 KAQAE 134 *9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 195 aa Download sequence |
MEGSDSITTV SSTPLSQSPS SSSSPASPPP LVLSPCAACR ILRRRCAGGC VLAPYFPPTE 60 PAKFAIAHRV FGASNIIKCL QELPESQRAD AVSSMVYEAN ARIRDPVYGS AGAICQLQKQ 120 VNDLQAQLAK AQAELLNMEC QQANLVAFVC RELAQSHHQC FDDFNASPHS GFHSITQTNF 180 DDYSNVNQIW EPLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G07900.1 | 1e-45 | LBD family protein |