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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 347aa MW: 38902 Da PI: 6.5677 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.1 | 1.9e-41 | 66 | 143 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dls++keyhrrh+vC+ hsk+pvv+v+g+e+rfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ XP_023531791.1 66 TCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVKGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQP 143 5**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MDWGWRKFSG ERVTFQENKQ NPTSFSDSIG SNNEEEPILK GSSQESSTSH GSSKRTRLLH 60 ASQNQTCLVD GCDSDLSNCK EYHRRHRVCD LHSKTPVVMV KGEEKRFCQQ CSRFHSLGEF 120 DEVKRSCRKR LDGHNRRRRK PQPESLFISS RDFLSNCKGP IVLQFSDQQV HVPDELGRSL 180 WPMRTEENSS LVPSNSSGFF SFGGGDNKQL PFLQPKNGSK QGKHMVSSQF CFNQQLPDAI 240 SQVSEGDSQK TVPPNNSPED SGCALYLLSS HPVQALPEAG LSSLVQSHLS LPVQTQEETE 300 LNFSSLSDFS ESFGSKDKAV SKTNVHHSEL GLEMEEESNG LFPISWE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 141 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 1e-45 | SBP family protein |