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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ZF-HD | ||||||||
Protein Properties | Length: 284aa MW: 30846.4 Da PI: 8.875 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 109.4 | 2e-34 | 62 | 118 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 ++YkeClkNhAas+Ggha+DGCgEfmps++++ ++++++kCaACgCHRnFHRr++e+ XP_023531351.1 62 LVYKECLKNHAASMGGHALDGCGEFMPSPTATtTDPTSFKCAACGCHRNFHRRDPED 118 68***************************999899******************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MDLIPAISTA AAAITTGGGG AVKSPEFDAE TPIKFQPTTK SHSFTNGVLK RHHHTPPPPP 60 SLVYKECLKN HAASMGGHAL DGCGEFMPSP TATTTDPTSF KCAACGCHRN FHRRDPEDTI 120 ATPTTTHVIE YQPHHRHHPP PHRSPNSASP PPISSSYYPS APHMLLALSG GMTENAGGGF 180 HHSILTPSSN SRKRFRSKFT QNQKDKMYEF AEKVGWKIQK RDEDLIQDFC SHVGVDRGVL 240 KVWMHNNKNT LCKKDNAQNI NGHGDGDNDT KINRAGANGS SSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28920.1 | 5e-65 | ZF-HD family protein |