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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023531132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 534aa MW: 58497.2 Da PI: 7.6783 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.9 | 1e-41 | 173 | 249 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrr++q XP_023531132.1 173 CQVYGCNKDLSSSKDYHKRHKVCEAHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRRPQV 249 **************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 534 aa Download sequence |
MESWSYVSEG KGCMSDEMNS PTSSLARNKD SALGWDFKNP CNFSSTMLAT GQQVNNQGFG 60 ELVFPEMIGK QLPDICDILS SKVVGGRFLN PAMNSSNAFL GEDESTSKFS GSIVDSSGRD 120 SSFIDLNLGR FADQRDAHGY KIFKGAPIVS SSESSMPSKR VRASGLNSQT YFCQVYGCNK 180 DLSSSKDYHK RHKVCEAHSK TAKVIVNGIE QRFCQQCSRF HLLAEFDDGK RSCRKRLAGH 240 NERRRRPQVA LNSSRAGRFL QSYNGSRFQG TPATSFICQE ILPSGIMHPE KYGTSDWCRT 300 VKIEDKNEYM PLSAVHVPSG HLHSKSLFSP YDIDTQIPPF HDNGLNAAAT NMFKENSNQY 360 PISVGGVFNN PSLGSEYFSV FSAATTDRIS GLSDSGCALS LLSSQTQNSS THSSGIPIAR 420 PLVLLEGQNH YSMSQLSEKL MGVSSQVSVS GVSNKFNSSG LNTLGPISTP ETSDAVNFES 480 TNRVFHGSNL ADTTEGSPTI DLLQLSSQLH RVEHERQVMQ VKQESNAFCC LRIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 3e-47 | SBP family protein |