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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526733.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 1002aa MW: 110735 Da PI: 6.0668 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.9 | 2.2e-41 | 155 | 232 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+akeyhrrhkvCe+hska+++lv++++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk ++ XP_023526733.1 155 VCQVEDCGADLSNAKEYHRRHKVCETHSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINP 232 6**************************************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1002 aa Download sequence |
MEAGYGGEAC QLYGMSSMDL RAAVGKRSLE WDLNDWKWDG DLFIATPLNT VESDHLNRQL 60 FPIVSGIPLT TGGSSNSSSS CSDEANMGIE KGKREVEKRR RISGIEDENL NDEARSLSLK 120 IGGNVSQMVE RDAGSWEGSS GKKSKLGGGA SNRAVCQVED CGADLSNAKE YHRRHKVCET 180 HSKASNALVA NVMQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKI NPDTVVNGNS 240 PPDEQTSSYL LLTLLRILAN LHSNGSNQTT DQDLLSHLIR TLSCQSSEHG GKNLTGILHE 300 PQKLLNNGAL IGKSDLVSTF LSNGPPVPLR SSKQHDTIPI SEAPVQAIGR DGDTPAVSCI 360 KPSTSNSPPA YSEIRDSQVG QCKMMNFDLN DAYVDSDDGM EDIERQALPV HMGTSSLECP 420 SWVQQDSHQS SPPQTSGNSD SASAQSPSSS AGEAQSRTDR IILKLFGKAP NDFPHVLRAQ 480 VLDWLSHSPT EIESYIRPGC VVLTVYTRQT EAAWDDLCHD LSTSFNSLLD VSDDAFWRTG 540 WVYVRVQHQI AFVYQGRVVV DTSLPLRNKN YCRITSVNPV AVSTSKKAIF SVKGRNLTQP 600 TTRLLCAIEG KYLTQEASDE PTERDDNSNA LDDSRCVTFS CSIPVVYGRG FIEVEDDGFS 660 SSFFPFIVAE EDVCSEICTL QSALELTETC SNSGETEELE GRSNAMEFIH EIGWLFHRNQ 720 LKSRLGDLDP NENLFSLPRF KWLMEFSMDH DWCAVVKKLL DVLLDGTVDA GDHSSLNLAL 780 MDMSLLHRAV RKNSRSLVEL LLVYPSKVKD TSSADSFLFR PNVVGPAGLT PLHIAAGKDD 840 SEDVLDALTN DPRMVGVEAW KSARDSTGST PEDYARLRGH YSYIRLVQRK INKRSAAAEH 900 VVVEIPPSSV SDGRWNEKQN TDMSSSRFEI GRTEVKHCRQ CVRKPVRCGT SSSASLVYRP 960 AMLSMVAIAA VCVCVALLFK SSPEVLYVFR PFRWELLDYG TS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 102 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 0.0 | SBP family protein |