PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526733.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SBP
Protein Properties Length: 1002aa    MW: 110735 Da    PI: 6.0668
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.92.2e-41155232178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqve+C adls+akeyhrrhkvCe+hska+++lv++++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk ++
  XP_023526733.1 155 VCQVEDCGADLSNAKEYHRRHKVCETHSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINP 232
                     6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1002 aa     Download sequence    
MEAGYGGEAC QLYGMSSMDL RAAVGKRSLE WDLNDWKWDG DLFIATPLNT VESDHLNRQL  60
FPIVSGIPLT TGGSSNSSSS CSDEANMGIE KGKREVEKRR RISGIEDENL NDEARSLSLK  120
IGGNVSQMVE RDAGSWEGSS GKKSKLGGGA SNRAVCQVED CGADLSNAKE YHRRHKVCET  180
HSKASNALVA NVMQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKI NPDTVVNGNS  240
PPDEQTSSYL LLTLLRILAN LHSNGSNQTT DQDLLSHLIR TLSCQSSEHG GKNLTGILHE  300
PQKLLNNGAL IGKSDLVSTF LSNGPPVPLR SSKQHDTIPI SEAPVQAIGR DGDTPAVSCI  360
KPSTSNSPPA YSEIRDSQVG QCKMMNFDLN DAYVDSDDGM EDIERQALPV HMGTSSLECP  420
SWVQQDSHQS SPPQTSGNSD SASAQSPSSS AGEAQSRTDR IILKLFGKAP NDFPHVLRAQ  480
VLDWLSHSPT EIESYIRPGC VVLTVYTRQT EAAWDDLCHD LSTSFNSLLD VSDDAFWRTG  540
WVYVRVQHQI AFVYQGRVVV DTSLPLRNKN YCRITSVNPV AVSTSKKAIF SVKGRNLTQP  600
TTRLLCAIEG KYLTQEASDE PTERDDNSNA LDDSRCVTFS CSIPVVYGRG FIEVEDDGFS  660
SSFFPFIVAE EDVCSEICTL QSALELTETC SNSGETEELE GRSNAMEFIH EIGWLFHRNQ  720
LKSRLGDLDP NENLFSLPRF KWLMEFSMDH DWCAVVKKLL DVLLDGTVDA GDHSSLNLAL  780
MDMSLLHRAV RKNSRSLVEL LLVYPSKVKD TSSADSFLFR PNVVGPAGLT PLHIAAGKDD  840
SEDVLDALTN DPRMVGVEAW KSARDSTGST PEDYARLRGH YSYIRLVQRK INKRSAAAEH  900
VVVEIPPSSV SDGRWNEKQN TDMSSSRFEI GRTEVKHCRQ CVRKPVRCGT SSSASLVYRP  960
AMLSMVAIAA VCVCVALLFK SSPEVLYVFR PFRWELLDYG TS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198102KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47070.10.0SBP family protein