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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526515.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 807aa MW: 90604.5 Da PI: 7.6497 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 118.1 | 4.4e-37 | 132 | 208 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gCe+d+se+k yhrrh+vC +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_023526515.1 132 RCQVPGCEVDISELKGYHRRHRVCLRCANAATVVLDGETKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRRRKP 208 6************************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 807 aa Download sequence |
MDNSPPSLLP QPLHDGAGMD LQLPMPDDSS TPLWDLGDLL DLAADDQFSF SLEQDNLPSA 60 SSHYLEIQSQ TSPPSNSDRI RKRDPRLTCS NFLAGRVPCA CPEIDAMLEE EAAATPGKKR 120 ARTARATAGT VRCQVPGCEV DISELKGYHR RHRVCLRCAN AATVVLDGET KRYCQQCGKF 180 HVLSDFDEGK RSCRRKLERH NNRRRRKPVD SAASMESDRS GVPLEDVSCD GDVGKDNILF 240 NNQTDQKEVV HLEPEHGLVT STICSAPDLQ NNMDGRLTLL AMGEAQVDGG KDNSKSLTSS 300 YCDNKSTYSS MCPTGRISFK LYDWNPAEFP RRLRLQIFEW LANMPVELEG YIRPGCIILT 360 AFVAMPKFMW IKLLEDPTTH VHNFVVARGR PLWGRGNMLV YLNNMIFRPV EGKSVMKIER 420 DMQAPRLHYI HPTCFEAGKP MEFVACGSHL RQPKFRSLVS FAGKYLSHDH SFVLSHCQKE 480 GDDAKWSDHQ LFKIYIPHTD HDLFGPAFVE VENHSGLSNF IPILIGDSET CSEMKTIQER 540 LDMSLLVEAT GSSHESCEHF SLRQKVHSEL MMDISWLLKK PSSEHVQHIM NSSQIQRFTR 600 LLKFLIRNDS TVILGRVLEH LKIVMENVES NGAVNGFIYP DLRFFEKYLD SARDVLQLNL 660 HKTGNSVLHL GHPKSKGDRV SQSCSENKLV SVVPGIVLKM VSRENGHFRS VAGSTSIGSV 720 ETVPLLNKNL GEKITVQAFT VKEESRKQEH SRKSCGLLFS GAHFRRQTTL FAVTFVAVCF 780 GICAALVHSH KVGDFAVSIR RCLIDKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 194 | 206 | RRKLERHNNRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.2 | 0.0 | SBP family protein |