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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023525693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 1005aa MW: 110805 Da PI: 6.4184 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.8 | 1.2e-41 | 154 | 231 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv++++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_023525693.1 154 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKNNP 231 6**************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1005 aa Download sequence |
METGYGGEAC QLYGMGSRDL RAAVGKKSLE WDLNDWKWDG DLFIARPLNL VESDHLGSQV 60 FPIVSGIPLT GGSSNSSSSC SDEANTGIEK GKREVEKRRR DNVMEDENLN DEARSLSLKV 120 GGNGCQIVEK EAGNWEGSSG KKTKLSGGNS SRAVCQVEDC GADLSNAKDY HRRHKVCEMH 180 SKASNALVAN VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKNN PDNVVNGNSP 240 PDEQTSSYLL LTLMRILANL HSNGSNKTTD QDLLSNLIRI LACQSGEHGG KNRSGILHEP 300 QNLLNGAKSD LVCTFLSNGP QVPLRSSKQP DTIPISETPV QATVRGGDTP AISSVKPSTS 360 NSPPAYSEIR DNTVGQCKMM NFDLNDVYVD SDDGMEDIER QARPVVHMGT SSLECPSWVQ 420 QDSHQSSPPQ TSGNSDSASA HSPSSSAGEA QSRTDRIILK LFGKAPNDFP HVLRAQVLNW 480 LSHSPTEIES YIRPGCVVLT IYLRQTEAAW NDLCHDLSTS LNRLLDVSDE AFWRTGWVYV 540 RVQHQIAFVY HGQVVVDTSL PLRNKNYCRI TSVNPVAVPL SKKAIFSVKG INLTRSTTRL 600 LCAIEGTYLT QEASDDSTES DDNSNARDDS QCVTFSCSIP VVYGRGFIEA EDDGLSSSSF 660 PFIVAEEDVC TEICTLQSAL EFTEICSNSG ETTELEGRSN AMEFIHEIGW LFHRNHLKSR 720 LGNLDPNENL FSLSRFKWLV EFSMDHDWCA VVKKLLDVLL DGTVDFGDHP SLNFALTEMS 780 LLHRAVRKNS RSLVELLLGY PSKVKDSSSS DGSTSSFLFR PDVVGPAGLT PLHIAAGKDD 840 SMDVLDALTN DPGMVGVEAW KSARDVTGST PEDYARLRGH YSYIRLVQRK INKRSSAGHV 900 VLDIPSTVSD GSWNQKQNTD MMTSSRFEIG RTKLKHSQQD CSRCVMKPSG FGTSSKASLV 960 YRPAMLSMVA IAAVCVCVAL LFKSSPEVLY VFRPFRWELL EYGTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60030.1 | 0.0 | SBP family protein |