PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521107.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SBP
Protein Properties Length: 1069aa    MW: 118270 Da    PI: 8.6816
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.72.2e-40152229178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqv++C++dls+ak+yhrrhkvCe hsk++++lv++++qrfCqqCsrfh lsefD++krsCrrrLa+hn rrrk+q+
  XP_023521107.1 152 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSSKALVAKQMQRFCQQCSRFHPLSEFDDGKRSCRRRLAGHNWRRRKTQP 229
                     6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1069 aa     Download sequence    
MDDVGAQVAP PIFIRQTLTS RYTDVPSIPK KRALSYQLPN FHHHLQPQGQ LHAHTWNPKA  60
WDWDSARFLT KPSKPPLLHS DAPSSDLKTT HDFAAATPST LNNTVDALEN QDESLRLNLG  120
GGLNLNYVEE PVSKPPKKVR PASPGAATTY PMCQVDNCKE DLSNAKDYHR RHKVCELHSK  180
SSKALVAKQM QRFCQQCSRF HPLSEFDDGK RSCRRRLAGH NWRRRKTQPE DVSSRPTRPG  240
SRGPQSSGNL DIVSLLTALA KAQGKNEDQT VKSLLSANSD HLIQILNKIN SLPLPADLAA  300
KLPNLESFRG KAPPQGSLQH QNILNGNSSS PSTMDLLTVL SATLAASAPD ALAVLSQKSS  360
LSSDSEKTRS SCRSGSDLHN RPLELPSVAG ERSSTSYQSP MEDSDGQVQG TRVGLALQLF  420
SSSPEHDTPP NLAASRKYFS SDSSNPIEER SPSSSPPLLQ KLFPMQSREE ANSNGKLPIR  480
KEVSGVEVRK PPSSNIPFEL FRELDGAGPN SFRPVPYQAG YTSSGSDHSP SSLNSDAQDR  540
TGRISFKLFD KDPSQFPGAL RTQIYNWLSN CPSEMESYIR PGCVVLSVYL SMTPIAWEQL  600
EENLVLHLKS LIHSEEIDFW RSGRFLVYTG RLLASHKDGK IRLNKSSKAW SNPELISVSP  660
LAVVGGQKTS FLLRGRNLKN PGTRIHCTSM GGYISEEVMG FCRQGIYDEI HSRSFKVGDA  720
SPTALGRCFI EVENGFRGNS FPVIIADAAI CKELRHLESE IDGFRVPEIS SESHSYVTSQ  780
PRLKDEILLF LNELGWLFQR ERSSSGLDNP DFLIRRFKFV LTFSAERDFC ALVKTLLDIL  840
VKKCLITHGL STKSLEMISE IQLLNRSVKR RCRRMVDLLV HYHVSGFGDA EKKYLFPPNS  900
IGPGGITPLH LAASMTDADD MVDALTNDPL EIGLECWSSQ LDANGQSPRA YALMRGNHSC  960
NELVERKLGD RKNGQVSLRI GNEIEQLEVS SGERGRAQVR SCSRCAIVAA KCNRRVPGSG  1020
THRLLHRPYI HSMLAIAAVC VCVCLFLRGS PDIGLVAPFK WENLDYGTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20980.10.0SBP family protein