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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023521107.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 1069aa MW: 118270 Da PI: 8.6816 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128.7 | 2.2e-40 | 152 | 229 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCe hsk++++lv++++qrfCqqCsrfh lsefD++krsCrrrLa+hn rrrk+q+ XP_023521107.1 152 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSSKALVAKQMQRFCQQCSRFHPLSEFDDGKRSCRRRLAGHNWRRRKTQP 229 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1069 aa Download sequence |
MDDVGAQVAP PIFIRQTLTS RYTDVPSIPK KRALSYQLPN FHHHLQPQGQ LHAHTWNPKA 60 WDWDSARFLT KPSKPPLLHS DAPSSDLKTT HDFAAATPST LNNTVDALEN QDESLRLNLG 120 GGLNLNYVEE PVSKPPKKVR PASPGAATTY PMCQVDNCKE DLSNAKDYHR RHKVCELHSK 180 SSKALVAKQM QRFCQQCSRF HPLSEFDDGK RSCRRRLAGH NWRRRKTQPE DVSSRPTRPG 240 SRGPQSSGNL DIVSLLTALA KAQGKNEDQT VKSLLSANSD HLIQILNKIN SLPLPADLAA 300 KLPNLESFRG KAPPQGSLQH QNILNGNSSS PSTMDLLTVL SATLAASAPD ALAVLSQKSS 360 LSSDSEKTRS SCRSGSDLHN RPLELPSVAG ERSSTSYQSP MEDSDGQVQG TRVGLALQLF 420 SSSPEHDTPP NLAASRKYFS SDSSNPIEER SPSSSPPLLQ KLFPMQSREE ANSNGKLPIR 480 KEVSGVEVRK PPSSNIPFEL FRELDGAGPN SFRPVPYQAG YTSSGSDHSP SSLNSDAQDR 540 TGRISFKLFD KDPSQFPGAL RTQIYNWLSN CPSEMESYIR PGCVVLSVYL SMTPIAWEQL 600 EENLVLHLKS LIHSEEIDFW RSGRFLVYTG RLLASHKDGK IRLNKSSKAW SNPELISVSP 660 LAVVGGQKTS FLLRGRNLKN PGTRIHCTSM GGYISEEVMG FCRQGIYDEI HSRSFKVGDA 720 SPTALGRCFI EVENGFRGNS FPVIIADAAI CKELRHLESE IDGFRVPEIS SESHSYVTSQ 780 PRLKDEILLF LNELGWLFQR ERSSSGLDNP DFLIRRFKFV LTFSAERDFC ALVKTLLDIL 840 VKKCLITHGL STKSLEMISE IQLLNRSVKR RCRRMVDLLV HYHVSGFGDA EKKYLFPPNS 900 IGPGGITPLH LAASMTDADD MVDALTNDPL EIGLECWSSQ LDANGQSPRA YALMRGNHSC 960 NELVERKLGD RKNGQVSLRI GNEIEQLEVS SGERGRAQVR SCSRCAIVAA KCNRRVPGSG 1020 THRLLHRPYI HSMLAIAAVC VCVCLFLRGS PDIGLVAPFK WENLDYGTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G20980.1 | 0.0 | SBP family protein |