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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 155aa MW: 17026.8 Da PI: 8.1591 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128.1 | 3.3e-40 | 71 | 147 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+++C+adls+ k+yh rhkvCe+h+ka +v+v+g++qrfCqqCsrfh l+efDe+krsCr+rLa+hn+rrrk+++ XP_023520290.1 71 CQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIHQRFCQQCSRFHGLQEFDETKRSCRKRLAGHNQRRRKSSS 147 **************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MATGKADGKR RLSYYDMEEE EEEEEEVEVV DGELGFGGDF NKKKKTLCSG GGSNKKSGSG 60 CGGEATAAPS CQADNCNADL SSSKRYHCRH KVCEFHAKAL AVMVAGIHQR FCQQCSRFHG 120 LQEFDETKRS CRKRLAGHNQ RRRKSSSDVH GGTST |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 145 | QRRRKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 4e-39 | SBP family protein |