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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023519233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 311aa MW: 34448.2 Da PI: 8.5124 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 134.1 | 4.6e-42 | 25 | 101 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v+++gl+qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_023519233.1 25 CLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIAGLNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQT 101 **************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MAPSTSGSSK RARGAHSGAI QPVSCLVDGC NSDLSNCRDY HRRHKVCELH SKTPQVTIAG 60 LNQRFCQQCS RFHSLEEFDE GKRSCRKRLD GHNRRRRKPQ TDLLPRSGGH FSYHQGAHLL 120 PFTSSQVFPP TTLSSHGWSS AGDPSVFHNQ NQELNFLEKQ RLFVEPSSYK AAQPLGFLHG 180 GPTTCRPLLR SINTLSENTG GERNKMVYYR FRVGVSESDC ALSLLSSSQQ AADNGSSGHL 240 GLSIIEQEQQ QRSAAISLLQ PLSHHHHHKL DSFENSESSS VHGAVNFPEI FGIPSENAGN 300 QSPSTLPFHW E |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 99 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 2e-50 | SBP family protein |