PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023519047.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SBP
Protein Properties Length: 520aa    MW: 57615.2 Da    PI: 7.5878
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023519047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.91.1e-41147223278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     Cqv gC++dl++ keyh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q 
  XP_023519047.1 147 CQVYGCNKDLTSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQV 223
                     **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MESWNYGSQG KGFVSDEMNS STNSPLRSKY SLLGWEFKNP CSFVENQSFG ELEFPQMLGK  60
QLADESVSHV LNTKIEEEST SKLSGSIVDS NNRDSSLIDL KLGRFIDQGD AHCSKYSKRA  120
AISSSTESST SQKRMRSQGV NFQAAFCQVY GCNKDLTSSK EYHKRHKVCE VHSKTAKVIV  180
NGIEQRFCQQ CSRFHLLVEF DDGKRSCRKR LAGHNERRRK PQVSFHSGRA QRLLQPYNGI  240
GDSRFQEKTP TATSFICKDI LSSGLYYPEK LGDNDWCKRV LVEAKNDYNS ISATSLSNRH  300
LNVKSPLLPY DFEVQIPPFQ EHGTSTAPSV NNMLCDTTCQ YSHNVGGPHI DTTHPLFHHT  360
TLSSEDFGVY DAASTIQGLS GIPDSGCALS LLSSQSQTAS NHSSIVHIPR AFVMSESPSN  420
YSMSELSEKL MGVSSQASST GISSKFASGM SEAQMGPILT CDRSDRTVAF QIPDGVLHRS  480
GLANSKANLS YEHTPTIDLL QLSSQLHRVE HQRHSMQDSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.12e-49SBP family protein