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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023519047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SBP | ||||||||
Protein Properties | Length: 520aa MW: 57615.2 Da PI: 7.5878 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.9 | 1.1e-41 | 147 | 223 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dl++ keyh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_023519047.1 147 CQVYGCNKDLTSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQV 223 **************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 520 aa Download sequence |
MESWNYGSQG KGFVSDEMNS STNSPLRSKY SLLGWEFKNP CSFVENQSFG ELEFPQMLGK 60 QLADESVSHV LNTKIEEEST SKLSGSIVDS NNRDSSLIDL KLGRFIDQGD AHCSKYSKRA 120 AISSSTESST SQKRMRSQGV NFQAAFCQVY GCNKDLTSSK EYHKRHKVCE VHSKTAKVIV 180 NGIEQRFCQQ CSRFHLLVEF DDGKRSCRKR LAGHNERRRK PQVSFHSGRA QRLLQPYNGI 240 GDSRFQEKTP TATSFICKDI LSSGLYYPEK LGDNDWCKRV LVEAKNDYNS ISATSLSNRH 300 LNVKSPLLPY DFEVQIPPFQ EHGTSTAPSV NNMLCDTTCQ YSHNVGGPHI DTTHPLFHHT 360 TLSSEDFGVY DAASTIQGLS GIPDSGCALS LLSSQSQTAS NHSSIVHIPR AFVMSESPSN 420 YSMSELSEKL MGVSSQASST GISSKFASGM SEAQMGPILT CDRSDRTVAF QIPDGVLHRS 480 GLANSKANLS YEHTPTIDLL QLSSQLHRVE HQRHSMQDSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 2e-49 | SBP family protein |